Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs775419 chr12:69689123 A>T

Sequence
gtgctccggctttggactcaggga[A/T]tctgccaaacattttccgccatcc
ASB in cell types
K562 (myelogenous leukemia) keratinocytes
ASB for transcription factors
SNAI2_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 3.34 n/a 2.7·10-101.00 1.50 n/a No Hit
SMCA4_HUMAN -1.56 1.73 1.000.02 2.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP adiponectin levels ldl cholesterol parkinsons disease urinary albumin-to-creatinine ratio
GTEx eQTL Adrenal_Gland Artery_Aorta Artery_Tibial Heart_Atrial_Appendage Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pituitary Testis Thyroid

Download