rs776525 chr2:120735812 T>G
- Sequence
gcgggcgggctggctggcgggttc[T/G]tggggcccgggtgtgcccgcaccg
- ASB in cell types
- A549 (lung carcinoma) PC9 (lung adenocarcinoma) hepatocytes
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN KDM5B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.23 | 1.02 | 1.95 | n/a | n/a | |||
| RAD21_HUMAN | -0.09 | 1.11 | 1.98 | n/a | n/a | |||
| KDM5B_HUMAN | 1.79 | n/a | 2.00 | n/a | n/a |
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