rs777080 chr1:105556475 A>C
- Sequence
gcttaatggggcagaaagcagtaa[A/C]gattggaaaacaatgccagttaaa
- ASB in cell types
- HEK293T (embryonic kidney)
- ASB for transcription factors
- PKNX1_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 2.45 | n/a | 1.33 | n/a | No Hit | |||
| CTBP1_HUMAN | 2.20 | -2.62 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP coronary artery disease (cad), neuroticism, panic disorder, parkinsons disease, total cholesterol