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rs7772990 chr6:151401065 C>T

Sequence
tgggcacctgtaatcccagctgct[C/T]gggaggctgaggcaggagaatcgc
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.65 0.12 0.011.00 1.29
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Motif analysis

No data available

Genetic associations

GRASP breast cancer
GTEx eQTL Adipose_Subcutaneous Brain_Caudate_basal_ganglia Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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