rs7782240 chr7:95550132 A>G
- Sequence
ttacaggaacatccaggttcccta[A/G]aaatttatctcttccatgatgatg
- ASB in cell types
- HEK293 (embryonic kidney) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- ZIC2_HUMAN ANDR_HUMAN ZN189_HUMAN EP300_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZIC2_HUMAN | 2.58 | n/a | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 0.55 | 0.75 | 1.72 | n/a | No Hit | |||
| ZN189_HUMAN | 2.31 | n/a | 2.00 | n/a | n/a | |||
| EP300_HUMAN | -0.37 | 1.26 | 1.37 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Vagina