rs7788230 chr7:151897378 A>G
- Sequence
gcccccaccatccagacacctccc[A/G]ccagactccacctccaaccctggg
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- TZAP_HUMAN ZFHX2_HUMAN SCRT2_HUMAN ZBT17_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TZAP_HUMAN | 2.61 | n/a | 2.00 | n/a | n/a | |||
| ZFHX2_HUMAN | 2.32 | n/a | 2.00 | n/a | n/a | |||
| SCRT2_HUMAN | 2.26 | n/a | 2.00 | n/a | n/a | |||
| ZBT17_HUMAN | 2.28 | -3.43 | 2.00 | n/a | No Hit | |||
| KLF15_HUMAN | 2.14 | -1.70 | 2.00 | 1.46 | Weak Discordant |
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Motif analysis
