rs7801617 chr7:22718463 G>A
- Sequence
tgagaactcttcagggctctcctc[G/A]tccttttcactcagggccccaaag
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.77 | -0.54 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.76 | -0.46 | 2.00 | n/a | n/a | |||
| JUN_HUMAN | 1.28 | -0.47 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, chronic kidney disease, escitalopram treated major depressive disorder, partial epilepsy, refractive error, serum creatinine, tetrology of fallot, total cholesterol, total serum bilirubin
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Skin_Sun_Exposed_Lower_leg