rs780253 chr1:233607625 G>A
- Sequence
ctctttttcagcatcaaggccacc[G/A]cccccgatatagtcatggtctgaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- RING2_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RING2_HUMAN | n/a | 2.40 | 2.50 | n/a | n/a | |||
| EGR1_HUMAN | -2.76 | 2.10 | 3.00 | -0.62 | Weak Discordant |
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Motif analysis
