rs7807308 chr7:143737311 G>C
- Sequence
ttgtggcaaacacagtctcttgcc[G/C]tggttttaatttaaaagagatatt
- ASB in cell types
- K562 (myelogenous leukemia) thyroid gland MCF7 (Invasive ductal breast carcinoma) heart left ventricle
- ASB for transcription factors
- KDM1A_HUMAN HDAC1_HUMAN RING2_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 1.68 | -1.06 | 1.50 | n/a | n/a | |||
| HDAC1_HUMAN | 1.28 | -0.56 | 1.50 | n/a | n/a | |||
| RING2_HUMAN | 1.62 | -2.17 | 1.50 | n/a | n/a | |||
| SMCA4_HUMAN | 1.57 | -0.94 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Lung, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood