rs780830 chr10:16843519 C>G
- Sequence
tagttaattcagaatcagatgaaa[C/G]tcgagttttctaatcttcacccct
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) foreskin keratinocyte VCaP (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.02 | 1.10 | 1.72 | n/a | n/a | |||
| SMC3_HUMAN | -0.04 | 1.07 | 1.87 | n/a | n/a |
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