rs78154367 chr16:25258175 C>T
- Sequence
tgccggggaaggagagcacgggag[C/T]ggggactcctgtgtctggcggagg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HEK293T (embryonic kidney) liver
- ASB for transcription factors
- ZN133_HUMAN GABP1_HUMAN PRGR_HUMAN AFF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN133_HUMAN | 2.53 | n/a | 2.00 | n/a | n/a | |||
| GABP1_HUMAN | 1.97 | n/a | 2.25 | n/a | n/a | |||
| PRGR_HUMAN | 2.01 | n/a | 2.50 | n/a | No Hit | |||
| AFF1_HUMAN | 1.90 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Stomach, Thyroid