rs7820334 chr8:10716192 C>T
- Sequence
cttcctgtggctgctgggacaggg[C/T]ggggaaggaaggctggccggagcg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN HDAC1_HUMAN MTG16_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.27 | -2.84 | 2.00 | n/a | No Hit | |||
| HDAC1_HUMAN | 1.81 | -0.88 | 2.00 | n/a | n/a | |||
| MTG16_HUMAN | 2.19 | n/a | 2.00 | n/a | n/a | |||
| REQU_HUMAN | 1.78 | -1.26 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood