rs782444 chr3:127691098 T>C
- Sequence
cactcccagggtagctctgggcca[T/C]aggcaggcccaggcccaggcctag
- ASB in cell types
- erythroid cells MCF7 (Invasive ductal breast carcinoma) human brain microvascular endothelial cells
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| erythroid cells | 2.11 | -2.78 | 2.00 | |||
| MCF7 (Invasive ductal breast carcinoma) | 0.28 | 0.56 | 1.47 | |||
| human brain microvascular endothelial cells | 1.74 | -1.53 | 1.33 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid, Whole_Blood