rs782958 chr15:61033189 C>T
- Sequence
cttggaacaaatttaggctccagt[C/T]tatggctacaaaacaaacaggaga
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.37 | 1.67 | 1.48 | n/a | No Hit | |||
| HXB13_HUMAN | -0.56 | 1.96 | 1.50 | 4.84 | Concordant |
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Motif analysis
