rs783027 chr15:31129521 T>C
- Sequence
tactcagctgtagtttgtcaactt[T/C]ctgaaaaatacatgaaattgctgc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HeLa S3 (cervical adenocarcinoma) A549 (lung carcinoma)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.60 | 0.48 | 1.67 | n/a | n/a | |||
| RAD21_HUMAN | 0.52 | 0.72 | 1.59 | n/a | n/a |
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