rs78381277 chr7:35694919 C>G
- Sequence
gctcccttcctgctgcgcggcgac[C/G]ggcacggcccagccccgggtctcg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- NRF1_HUMAN MNT_HUMAN CEBPB_HUMAN CTBP1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | n/a | 0.72 | 2.00 | n/a | No Hit | |||
| MNT_HUMAN | -0.99 | 2.22 | 2.12 | n/a | n/a | |||
| CEBPB_HUMAN | 0.26 | 2.05 | 2.60 | n/a | No Hit | |||
| CTBP1_HUMAN | -0.80 | 2.19 | 2.00 | n/a | n/a | |||
| ATF1_HUMAN | n/a | 2.27 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood