rs784080 chr12:103957279 A>C
- Sequence
tgccggcgcaggcacgtgacgcag[A/C]ggaggtggggcgctgggagaaagc
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte
- ASB for transcription factors
- COT1_HUMAN EGR1_HUMAN MNT_HUMAN E4F1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 2.19 | 1.67 | n/a | No Hit | |||
| EGR1_HUMAN | -2.32 | 2.51 | 2.25 | 1.23 | Weak Concordant | |||
| MNT_HUMAN | -1.93 | 1.88 | 2.00 | n/a | n/a | |||
| E4F1_HUMAN | -0.94 | 2.01 | 1.67 | n/a | n/a | |||
| ZNF24_HUMAN | -0.83 | 1.45 | 1.97 | n/a | n/a |
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Motif analysis
