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rs784084 chr12:103962686 C>T

Sequence
tccctttttctagaaatttctgca[C/T]actcagccccttgatttgcatata
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells)
ASB for transcription factors
PKNX1_HUMAN RFX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN -1.29 1.80 1.002.0·10-3 1.67 n/a No Hit
RFX1_HUMAN -2.13 2.19 1.006.8·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Muscle_Skeletal Testis

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