rs7844183 chr8:22109378 C>A
- Sequence
cgcgggctagagtgcgctgcggag[C/A]ccgctcccagtccctgcggcagcg
- ASB in cell types
- HepG2 (hepatoblastoma) ME-1 (acute myeloid leukemia ) cord blood-derived mononuclear cells GM12878 (female B-cells)
- ASB for transcription factors
- ELF1_HUMAN SP130_HUMAN KMT2A_HUMAN NFYC_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 2.03 | -1.46 | 1.47 | n/a | No Hit | |||
| SP130_HUMAN | 2.46 | -2.77 | 1.33 | n/a | n/a | |||
| KMT2A_HUMAN | 2.16 | -1.96 | 1.33 | n/a | n/a | |||
| NFYC_HUMAN | 2.01 | -2.63 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood