ADASTRA v1.6.10
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rs78461755
chr7:5514107
G
>
C
Sequence
gtcctgcgcaccgcacccctcatg[G/C]aatagcgtcgcctcctctctacct
ASB in cell types
A549 (lung carcinoma)
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
JUN_HUMAN
BCL3_HUMAN
CEBPB_HUMAN
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View in UCSC Genome Browser
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN
-0.33
1.39
1.00
1.0·10
-6
2.00
n/a
No Hit
BCL3_HUMAN
-0.09
1.02
0.59
0.03
2.00
n/a
n/a
CEBPB_HUMAN
-0.93
1.22
1.00
0.03
2.12
n/a
No Hit
Items per page:
5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2-scale
log2(Alt/Ref motif p-value)