rs7859525 chr9:135225348 T>C
- Sequence
ctcgggcataatgggctccagccc[T/C]ctctgcagtcaggagcctggtccc
- ASB in cell types
- neural cell
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -1.72 | 1.94 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -2.08 | 2.09 | 1.00 | 3.62 | Concordant | |||
| SMC3_HUMAN | -1.83 | 1.96 | 1.00 | n/a | n/a |
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Motif analysis
