rs78607708 chr3:42055463 G>A
- Sequence
acagagttgtgcaacatcaccaca[G/A]caaatcttatttgttgagacaggt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN SMAD4_HUMAN HLF_HUMAN FOXA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.12 | -1.30 | 1.33 | n/a | No Hit | |||
| SMAD4_HUMAN | 2.03 | -2.06 | 1.33 | n/a | No Hit | |||
| HLF_HUMAN | 1.91 | -2.20 | 1.50 | n/a | No Hit | |||
| FOXA3_HUMAN | 1.53 | -1.79 | 1.33 | n/a | No Hit | |||
| CEBPA_HUMAN | 1.44 | -2.29 | 1.50 | n/a | No Hit |
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