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rs7867322 chr9:133144519 T>C

Sequence
gcctgtttacagctgtgcgcaagc[T/C]cctcgcgacccgaaagcgagacct
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) H54 LoVo (colorectal adenocarcinoma) liver
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.13 0.10 1.2·10-91.00 1.44 n/a No Hit
RAD21_HUMAN 1.41 -0.10 7.0·10-31.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland Cells_Cultured_fibroblasts Esophagus_Mucosa Pituitary

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