rs7870137 chr9:129268859 G>C
- Sequence
tcccctgcaaggagagtgtcacat[G/C]actgggtctgaccagtggaatgtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- SUZ12_HUMAN HCFC1_HUMAN ELF1_HUMAN ZN217_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SUZ12_HUMAN | 2.61 | n/a | 1.50 | n/a | n/a | |||
| HCFC1_HUMAN | 1.18 | n/a | 2.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.50 | -1.55 | 1.67 | n/a | No Hit | |||
| ZN217_HUMAN | 2.19 | n/a | 1.50 | n/a | n/a | |||
| IKZF1_HUMAN | 1.73 | -1.06 | 1.33 | n/a | No Hit |
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Motif analysis
