rs787332 chr10:28811942 T>C
- Sequence
atgagataggaggttggcacaaag[T/C]acaggtcacaaaggccttgctgat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN592_HUMAN NR2C1_HUMAN ZN740_HUMAN CREB3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN592_HUMAN | n/a | 1.25 | 2.00 | n/a | n/a | |||
| NR2C1_HUMAN | -0.54 | 2.67 | 2.00 | 1.98 | Weak Concordant | |||
| ZN740_HUMAN | n/a | 2.55 | 1.50 | n/a | n/a | |||
| CREB3_HUMAN | -2.40 | 2.18 | 1.50 | n/a | n/a | |||
| CAVN1_HUMAN | n/a | 2.78 | 2.00 | n/a | n/a |
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Motif analysis
