ADASTRA v1.6.10
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rs788714
chr7:46081122
T
>
C
Sequence
caagggctgagaattatgatgagt[T/C]gctcatcgtaatgagtggttttaa
ASB in cell types
induced pluripotent stem cells
coronary artery smooth muscle
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
FOS_HUMAN
DUX4_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOS_HUMAN
n/a
2.98
1.00
4.6·10
-4
2.50
n/a
n/a
DUX4_HUMAN
n/a
1.93
1.00
2.6·10
-3
1.00
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
waist hip ratio
,
years of education
GTEx eQTL
Artery_Tibial
,
Muscle_Skeletal
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)