rs789495 chr6:150254169 C>T
- Sequence
tgttccagacccttttttcaagaa[C/T]gtttatatgtatagcaaacagtct
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.49 | 0.28 | 1.30 |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. controls), hdl cholesterol, ldl cholesterol, parkinsons disease, refractive error
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg