rs789529 chr11:131696042 C>T
- Sequence
taattatcattgcaaacaactagc[C/T]tctcaacagaaagtgttgttgatg
- ASB in cell types
- embryonic kidney
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -1.45 | 1.47 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder in alcoholics, hypertension (early onset hypertension), lung function, predicted ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc), neuroticism, nicotine initiation (smoking), transmission distortion