rs789650 chr1:232568397 C>G
- Sequence
ttaattgcttgcttggtgtggggg[C/G]aaactgccaaacatgtggtcatgg
- ASB in cell types
- HEK293 (embryonic kidney) LNCaP (prostate carcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN ZN600_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.81 | -0.26 | 2.94 | n/a | No Hit | |||
| ANDR_HUMAN | 1.84 | n/a | 1.50 | n/a | No Hit | |||
| ZN600_HUMAN | 2.97 | n/a | 4.00 | n/a | n/a |
Items per page:
1 – 3 of 3