rs7898089 chr10:45261428 T>C
- Sequence
ctatgataaaaacatataactgtc[T/C]ctagatgaagttgcaagtccttgt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MAFG_HUMAN ZN316_HUMAN KDM1A_HUMAN TAL1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFG_HUMAN | n/a | 3.38 | 1.33 | n/a | No Hit | |||
| ZN316_HUMAN | -0.51 | 3.03 | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | -2.50 | 2.46 | 1.33 | n/a | n/a | |||
| TAL1_HUMAN | n/a | 2.12 | 1.33 | n/a | No Hit | |||
| NCOR1_HUMAN | -0.54 | 1.60 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood