rs79075977 chr12:99111799 T>C
- Sequence
gctttcttgccagcctgctatggt[T/C]accatggcaacaaggcgatggtgg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- RFX1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | 2.87 | n/a | 2.00 | 0.10 | Weak Discordant | |||
| FOXA1_HUMAN | -0.07 | 0.85 | 1.42 | n/a | No Hit |
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Motif analysis
