rs79107838 chr1:234499409 C>T
- Sequence
ccctgcacaactgtgctcctcctg[C/T]ccttcccctcctggggacacatca
- ASB in cell types
- foreskin keratinocyte CD14+ monocytes periferal blood macrophages
- ASB for transcription factors
- STAT1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.85 | -3.38 | 2.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.88 | 0.15 | 1.33 | -0.17 | Weak Concordant |
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Motif analysis
