rs79119688 chr12:12008562 G>A
- Sequence
tctagtgggcagccagcggtgggc[G/A]ccactgagccagacggtctttgtt
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) MCF10A (breast epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.71 | 0.07 | 1.19 | -0.43 | Weak Concordant |
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Motif analysis
