rs791366 chr5:173789442 T>C
- Sequence
ggcagatgccaccacccccagaaa[T/C]gagtaaaccaggaggctgggcctg
- ASB in cell types
- liver K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium) GM12878 (female B-cells)
- ASB for transcription factors
- GCR_HUMAN HNF4A_HUMAN RAD21_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.03 | -1.71 | 2.00 | n/a | No Hit | |||
| HNF4A_HUMAN | 1.41 | -1.32 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 1.29 | -0.73 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | 1.63 | 0.07 | 1.33 | n/a | No Hit |
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