rs791367 chr5:173789448 A>G
- Sequence
tgccaccacccccagaaatgagta[A/G]accaggaggctgggcctggggtgc
- ASB in cell types
- liver K562 (myelogenous leukemia) GM12878 (female B-cells) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN HNF4A_HUMAN IKZF1_HUMAN RXRA_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.94 | -1.51 | 2.00 | n/a | No Hit | |||
| HNF4A_HUMAN | 1.60 | -1.42 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.67 | 0.15 | 1.33 | n/a | No Hit | |||
| RXRA_HUMAN | 1.08 | -0.40 | 1.33 | n/a | No Hit |
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