rs7917400 chr10:17092366 G>A
- Sequence
agggagtggggtaataaaccatag[G/A]cattcaaaccagagcaactccatc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PYGO2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PYGO2_HUMAN | 2.42 | -3.68 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Colon_Sigmoid, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg