rs7920204 chr10:21337046 C>T
- Sequence
gagaacactgatgacttgaggcaa[C/T]gccagagcccttctccaaatgaat
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- JUN_HUMAN RAD21_HUMAN EP300_HUMAN TEAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.19 | 1.21 | 1.92 | n/a | No Hit | |||
| RAD21_HUMAN | -0.36 | 1.04 | 1.96 | n/a | n/a | |||
| EP300_HUMAN | -0.04 | 1.57 | 2.00 | n/a | n/a | |||
| TEAD3_HUMAN | 1.39 | -1.66 | 1.33 | n/a | n/a | |||
| BCL3_HUMAN | -0.56 | 0.77 | 1.92 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP asthma, eye color, infant head circumference, major depressive disorder (narrow definition) (males), neuroblastoma (brain cancer)