ADASTRA v1.6.10
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rs792593
chr12:31262057
C
>
T
Sequence
tccagaaactggtgacaatactta[C/T]attacaattgtaattaagcaagga
ASB in cell types
K562 (myelogenous leukemia)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.16
0.91
1.00
4.3·10
-5
2.08
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
acute lung injury following major trauma
,
infant head circumference
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cortex
,
Brain_Hippocampus
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Ovary
,
Pancreas
,
Prostate
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Stomach
,
Testis
,
Thyroid
,
Uterus
,
Vagina
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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