rs792686 chr5:172713368 C>A
- Sequence
ggcctggtttgactccttccccgg[C/A]agcttctcagctgtgaccagcaga
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.37 | 0.65 | 1.30 | n/a | No Hit |
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