rs793017 chr5:172859505 G>A
- Sequence
aagggtgggaaaaaaaaatgtcct[G/A]aaggtcacagtgccgtcccaagcc
- ASB in cell types
- liver
- ASB for transcription factors
- RXRA_HUMAN HNF4A_HUMAN SP1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | -1.68 | 2.24 | 1.33 | 1.08 | Weak Concordant | |||
| HNF4A_HUMAN | -1.42 | 1.51 | 1.33 | n/a | No Hit | |||
| SP1_HUMAN | -0.50 | 2.03 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | -1.11 | 1.18 | 1.33 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
Genetic associations
GRASP longevity (exceptional longevity), longstanding arthritis, maternal transmission distortion, sporadic creutzfeldt-jakob disease, tetrology of fallot