rs79414494 chr11:19796337 T>G
- Sequence
cagcaagaaagagggccctctgcc[T/G]caatcctcatgcaggtgcacctta
- ASB in cell types
- upper lobe of left lung
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | n/a | 1.59 | 1.33 | 4.05 | Concordant |
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Motif analysis
