rs79417936 chr2:56183860 C>T
- Sequence
cccagccctcccgggcaggacagc[C/T]gggagcgcacctcgagggcccggg
- ASB in cell types
- GM12878 (female B-cells) MCF7 (Invasive ductal breast carcinoma) cranial neural crest cells
- ASB for transcription factors
- CTCF_HUMAN AP2A_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.28 | 0.75 | 1.35 | 0.14 | Weak Concordant | |||
| AP2A_HUMAN | 1.98 | -1.23 | 2.00 | n/a | No Hit |
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Motif analysis
