rs794706 chr1:173568699 T>C
- Sequence
ttcctcttttagctctttgaggaa[T/C]tgccagacagtgttataattgtcc
- ASB in cell types
- periferal blood macrophages HL-60 (acute myeloid leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| periferal blood macrophages | 1.51 | 0.22 | 2.00 | |||
| HL-60 (acute myeloid leukemia) | -1.96 | 1.95 | 1.50 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood