ADASTRA v1.6.10
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rs79502
chr22:39131578
C
>
T
Sequence
tgagctgggcacctcaggcccacc[C/T]gtcccaggtcacacccctggagtt
ASB in cell types
monocyte-derived macrophages
ASB for transcription factors
TF65_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN
n/a
2.22
1.00
0.01
2.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Cerebellum
,
Esophagus_Muscularis
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)