rs79624003 chr7:73598455 A>G
- Sequence
actaatccattaaactattcatct[A/G]tgtatccatccaccagcccaccca
- ASB in cell types
- K562 (myelogenous leukemia)
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.43 | 0.42 | 1.41 |
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Motif analysis
No data available
Genetic associations
EMBL-EBI hdl cholesterol levels, hdl cholesterol levels in current drinkers, hdl cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df), hdl cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df), triglyceride levels, triglyceride levels in current drinkers, triglyceride levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df), triglyceride levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df)
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid