rs797377 chr14:34063808 A>G
- Sequence
ccccactgggccccagtacctgag[A/G]gaggccaggaaaatagcatctgat
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- MEF2B_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | -2.67 | 2.36 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | -0.98 | 1.24 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, irritible bowel syndrome, rheumatoid arthritis