ADASTRA v1.6.10
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rs797802
chr7:83947528
A
>
C
Sequence
tgtgagtatcagctaagacaggct[A/C]ttagctggatctaaaagagcagca
ASB in cell types
SK-N-SH (neuroblastoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
SK-N-SH (neuroblastoma)
2.37
-0.30
5.2·10
-3
1.00
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
ldl cholesterol
,
parkinsons disease
,
total cholesterol
GTEx eQTL
Adrenal_Gland
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Pituitary
,
Stomach
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale