ADASTRA v1.6.10
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rs798905
chr7:121278726
T
>
C
Sequence
ccagccttttctgagatgacttga[T/C]acaaaatcctgtttcaaagggagt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MAFG_HUMAN
EMSY_HUMAN
TIF1A_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MAFG_HUMAN
n/a
3.90
1.00
9.0·10
-13
1.50
n/a
No Hit
EMSY_HUMAN
n/a
3.05
1.00
7.9·10
-9
1.50
n/a
n/a
TIF1A_HUMAN
-0.67
1.99
1.00
5.1·10
-3
1.50
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
fasting insulin
,
rheumatoid arthritis
,
total body bone mineral density (bmd)
GTEx eQTL
Cells_Cultured_fibroblasts
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)