Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs798906 chr7:121278686 C>T

Sequence
cagtgcccagtgagaataaattca[C/T]tggtcatgagggagcccagccttt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
EMSY_HUMAN TIF1A_HUMAN HDAC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EMSY_HUMAN n/a 2.80 1.002.1·10-6 1.50 n/a n/a
TIF1A_HUMAN -2.30 2.15 1.003.5·10-4 1.50 n/a n/a
HDAC2_HUMAN -2.00 1.81 1.000.01 1.50 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP total cholesterol
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

Download