rs799168 chr7:73636534 G>A
- Sequence
ccagagtaatgagtcattcaactg[G/A]ctggggtgccagcagggtgccagc
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes A549 (lung carcinoma)
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.92 | -2.91 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, coronary artery disease (cad), diastolic blood pressure (dbp), fasting insulin, hdl cholesterol, microalbuminuria, total cholesterol, triglycerides, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Minor_Salivary_Gland, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid